Methane production and oxidation potentials along a fen-bog gradient from southern boreal to subarctic peatlands in Finland

Methane (CH4) emissions from northern peatlands are projected to increase due to climate change, primarily because of projected increases in soil temperature. Yet, the rates and temperature responses of the two CH4 emission-related microbial processes (CH4 production by methanogens and oxidation by methanotrophs) are poorly known. Further, peatland sites within a fen-bog gradient are known to differ in the variables that regulate these two mechanisms, yet the interaction between peatland type and temperature lacks quantitative understanding. Here, we investigated potential CH4 production and oxidation rates for 14 peatlands in Finland located between c. 60 and 70 degrees N latitude, representing bogs, poor fens, and rich fens. Potentials were measured at three different temperatures (5, 17.5, and 30celcius) using the laboratory incubation method. We linked CH4 production and oxidation patterns to their methanogen and methanotroph abundance, peat properties, and plant functional types. We found that the rich fen-bog gradient-related nutrient availability and methanogen abundance increased the temperature response of CH4 production, with rich fens exhibiting the greatest production potentials. Oxidation potential showed a steeper temperature response than production, which was explained by aerenchymous plant cover, peat water holding capacity, peat nitrogen, and sulfate content. The steeper temperature response of oxidation suggests that, at higher temperatures, CH4 oxidation might balance increased CH4 production. Predicting net CH4 fluxes as an outcome of the two mechanisms is complicated due to their different controls and temperature responses. The lack of correlation between field CH4 fluxes and production/oxidation potentials, and the positive correlation with aerenchymous plants points toward the essential role of CH4 transport for emissions. The scenario of drying peatlands under climate change, which is likely to promote Sphagnum establishment over brown mosses in many places, will potentially reduce the predicted warming-related increase in CH4 emissions by shifting rich fens to Sphagnum-dominated systems.Peer reviewe

Greenhouse gas balances of managed peatlands in the Nordic countries – present knowledge and gaps

This article provides an overview of the effects of land-use on the fluxes of carbon dioxide (CO<sub>2</sub>), methane (CH<sub>4</sub>) and nitrous oxide (N<sub>2</sub>O) and from peatlands in the Nordic countries based on the field data from about 100 studies. In addition, this review aims to identify the gaps in the present knowledge on the greenhouse gas (GHG) balances associated with the land-use of these northern ecosystems. Northern peatlands have accumulated, as peat, a vast amount of carbon from the atmosphere since the last glaciation. However, the past land-use and present climate have evidently changed their GHG balance. Unmanaged boreal peatlands may act as net sources or sinks for CO<sub>2</sub> and CH<sub>4</sub> depending on the weather conditions. Drainage for agriculture has turned peatlands to significant sources of GHGs (mainly N<sub>2</sub>O and CO<sub>2</sub>). Annual mean GHG balances including net CH<sub>4</sub>, N<sub>2</sub>O and CO<sub>2</sub> emissions are 2260, 2280 and 3140 g CO<sub>2</sub> eq. m<sup>−2</sup> (calculated using 100 year time horizon) for areas drained for grass swards, cereals or those left fallow, respectively. Even after cessetion of the cultivation practices, N<sub>2</sub>O and CO<sub>2</sub> emissions remain high. The mean net GHG emissions in abandoned and afforested agricultural peatlands have been 1580 and 500 g CO<sub>2</sub> eq. m<sup>−2</sup>, respectively. Peat extraction sites are net sources of GHGs with an average emission rate of 770 g CO<sub>2</sub> eq. m<sup>−2</sup>. Cultivation of a perennial grass (e.g., reed canary grass) on an abandoned peat extraction site has been shown to convert such a site into a net sink of GHGs (−330 g CO<sub>2</sub> eq. m<sup>−2</sup>). In contrast, despite restoration, such sites are known to emit GHGs (mean source of 480 g CO<sub>2</sub> eq. m<sup>−2</sup>, mostly from high CH<sub>4</sub> emissions). Peatland forests, originally drained for forestry, may act as net sinks (mean −780 g CO<sub>2</sub> eq. m<sup>−2</sup>). However, the studies where all three GHGs have been measured at an ecosystem level in the forested peatlands are lacking. The data for restored peatland forests (clear cut and rewetted) indicate that such sites are on average a net sink (190 g CO<sub>2</sub> eq. m<sup>−2</sup>). The mean emissions from drained peatlands presented here do not include emissions from ditches which form a part of the drainage network and can contribute significantly to the total GHG budget. Peat soils submerged under water reservoirs have acted as sources of CO<sub>2</sub>, CH<sub>4</sub> and N<sub>2</sub>O (mean annual emission 240 g CO<sub>2</sub> eq. m<sup>−2</sup>). However, we cannot yet predict accurately the overall greenhouse gas fluxes of organic soils based on the site characteristics and land-use practices alone because the data on many land-use options and our understanding of the biogeochemical cycling associated with the gas fluxes are limited

Vaccine-Induced Antibody Responses against SARS-CoV-2 Variants-Of-Concern Six Months after the BNT162b2 COVID-19 mRNA Vaccination

The emergence of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) variants has raised concern about increased transmissibility, infectivity, and immune evasion from a vaccine and infection-induced immune responses. Although COVID-19 mRNA vaccines have proven to be highly effective against severe COVID-19 disease, the decrease in vaccine efficacy against emerged Beta and Delta variants emphasizes the need for constant monitoring of new virus lineages and studies on the persistence of vaccine-induced neutralizing antibodies. To analyze the dynamics of COVID-19 mRNA vaccine-induced antibody responses, we followed 52 health care workers in Finland for 6 months after receiving two doses of BNT162b2 vaccine with a 3-week interval. We demonstrate that, although anti-S1 antibody levels decrease 2.3-fold compared to peak antibody levels, anti-SARS-CoV-2 antibodies persist for months after BNT162b2 vaccination. Variants D614G, Alpha, and Eta are neutralized by sera of 100% of vaccinees, whereas neutralization of Delta is 3.8-fold reduced and neutralization of Beta is 5.8-fold reduced compared to D614G. Despite this reduction, 85% of sera collected 6 months postvaccination neutralizes Delta variant.</p

Nitrous oxide emission budgets and land-use-driven hotspots for organic soils in Europe

Peer reviewe

Soil carbon loss in warmed subarctic grasslands is rapid and restricted to topsoil

Global warming may lead to carbon transfers from soils to the atmosphere, yet this positive feedback to the climate system remains highly uncertain, especially in subsoils (Ilyina and Friedlingstein, 2016; Shi et al., 2018). Using natural geothermal soil warming gradients of up to +6.4 degrees C in subarctic grasslands (Sigurdsson et al., 2016), we show that soil organic carbon (SOC) stocks decline strongly and linearly with warming (-2.8 t ha(-1) degrees C-1). Comparison of SOC stock changes following medium-term (5 and 10 years) and long-term (> 50 years) warming revealed that all SOC stock reduction occurred within the first 5 years of warming, after which continued warming no longer reduced SOC stocks. This rapid equilibration of SOC observed in Andosol suggests a critical role for ecosystem adaptations to warming and could imply short-lived soil carbon-climate feedbacks. Our data further revealed that the soil C loss occurred in all aggregate size fractions and that SOC stock reduction was only visible in topsoil (0-10 cm). SOC stocks in subsoil (10-30 cm), where plant roots were absent, showed apparent conservation after > 50 years of warming. The observed depth-dependent warming responses indicate that explicit vertical resolution is a prerequisite for global models to accurately project future SOC stocks for this soil type and should be investigated for soils with other mineralogies

A Combination of N and S Antigens With IgA and IgG Measurement Strengthens the Accuracy of SARS-CoV-2 Serodiagnostics

Background: Primary diagnosis of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) infection is based on detection of virus RNA in nasopharyngeal swab samples. In addition, analysis of humoral immunity against SARS-CoV-2 has an important role in viral diagnostics and seroprevalence estimates.Methods: We developed and optimized an enzyme immunoassays (EIA) using SARS-CoV-2 nucleoprotein (N), S1 and receptor binding domain (RBD) of the viral spike protein, and N proteins from SARS, Middle East respiratory syndrome (MERS), and 4 low-pathogenic human CoVs. Neutralizing antibody activity was compared with SARS-CoV-2 IgG, IgA, and IgM EIA results.Results: The sensitivity of EIA for detecting immune response in COVID-19 patients (n = 101) was 77% in the acute phase and 100% in the convalescent phase of SARS-CoV-2 infection when N and RBD were used as antigens in IgG and IgA specific EIAs. SARS-CoV-2 infection significantly increased humoral immune responses against the 229E and NL63 N proteins. S1 and RBD-based EIA results had a strong correlation with microneutralization test results.Conclusions: The data indicate a combination of SARS-CoV-2 S1 or RBD and N proteins and analysis of IgG and IgA immunoglobulin classes in sera provide an excellent basis for specific and sensitive serological diagnostics of COVID-19.</p